BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035C11SP1|AL430031
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig864 1532 0.0
3x_Contig1354 147 4e-35
>3x_Contig864
Length = 2808
Score = 1532 bits (772), Expect = 0.0
Identities = 787/791 (99%), Gaps = 1/791 (0%)
Strand = Plus / Minus
Query: 87 accacacagaaatcacgggtttcgatatacttttcaattctttcaaaatactcaaagtta 146
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 2779 accacacagaaatcacgggtttcgatatacttttcaagtctttccaaatactcaaagtta 2720
Query: 147 cgggtggtggtgttacaaatgcaacactgattccatcgatctcatctcgctttccgtagt 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2719 cgggtggtggtgttacaaatgcaacactgattccatcgatctcatctcgctttccgtagt 2660
Query: 207 tggctaatccatccgcaattgtggtctcgatggtcaaaagttgttgcttggcaaacctct 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2659 tggctaatccatccgcaattgtggtctcgatggtcaaaagttgttgcttggcaaacctct 2600
Query: 267 tcgagattgaatctacactgagatctaaagctcctcctttcggattcaccggaatcacag 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2599 tcgagattgaatctacactgagatctaaagctcctcctttcggattcaccggaatcacag 2540
Query: 327 ataactcgtgttgtgcaaaccaatgcactatccggtttgcgaaatgcatatcttggtaca 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2539 ataactcgtgttgtgcaaaccaatgcactatccggtttgcgaaatgcatatcttggtaca 2480
Query: 387 ctttcccacatacgaagtataacctcttaggaccgaaaaagtccttcaatgcctgtttca 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 ctttcccacatacgaagtataacctcttaggaccgaaaaagtccttcaatgcctgtttca 2420
Query: 447 ccatttccaaagcgtttctctctcttttttttatttttggctgctgcaacgaagtrganc 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 2419 ccatttccaaagcgtttctctctcttttttttatttttggctgctgcaacgaagt-gaac 2361
Query: 507 tgttacactgtatccagtacttgaccatataaacaccttatcaaatgtaaacgaagatat 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2360 tgttacactgtatccagtacttgaccatataaacaccttatcaaatgtaaacgaagatat 2301
Query: 567 gtacctttcaaattgaatgactggctttcttgttgcaagatggctgattgtcccttaacg 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2300 gtacctttcaaattgaatgactggctttcttgttgcaagatggctgattgtcccttaacg 2241
Query: 627 aaactttacccccaagaaaaactatttctgggccaattcactatttttggaccctcctga 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 aaactttacccccaagaaaaactatttctgggccaattcactatttttggaccctcctga 2181
Query: 687 aaaaaaatgcggacctcaggtttcggaacatcttcgcattcaatatgaaatcacttgatg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2180 aaaaaaatgcggacctcaggtttcggaacatcttcgcattcaatatgaaatcacttgatg 2121
Query: 747 aactatcgttgatgtatggaagaagcaaggaacggcatagttactaaggactacaacaat 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 aactatcgttgatgtatggaagaagcaaggaacggcatagttactaaggactacaacaat 2061
Query: 807 catatggttgtaactgctaaactgagctcaatattctcaaggtatatcagataagctttt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 catatggttgtaactgctaaactgagctcaatattctcaaggtatatcagataagctttt 2001
Query: 867 ctacctgcttc 877
|||||||||||
Sbjct: 2000 ctacctgcttc 1990
>3x_Contig1354
Length = 7778
Score = 147 bits (74), Expect = 4e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 acaatcattgatgactctttcctcagggattttgagactttcgacagcgtagttaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7705 acaatcattgatgactctttcctcagggattttgagactttcgacagcgtagttaacaca 7764
Query: 61 atctagatcccagg 74
||||||||||||||
Sbjct: 7765 atctagatcccagg 7778
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6979
Number of Sequences: 1807
Number of extensions: 6979
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 2
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)